Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ChIP-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
CRISPRi RNA-seq
1
MPRA
1
RNA microarray
1
shRNA RNA-seq
1
siRNA RNA-seq
1
snATAC-seq
Assay category
5
DNA binding
3
Transcription
1
DNA accessibility
Target of assay
6
histone
6
histone modification
4
broad histone mark
narrow histone mark
1
control
Date released
5
August, 2017
3
March, 2023
1
April, 2020
1
August, 2021
1
February, 2023
1
October, 2022
Available data
5
bam
5
fastq
5
tagAlign
4
bed broadPeak
4
bed narrowPeak
4
bigBed narrowPeak
4
bigWig
1
txt
Organism
Homo sapiens
Biosample type
7
tissue
4
cell line
1
stem cell
Organ
6
pancreas
1
adipose tissue
1
connective tissue
1
epithelium
1
lung
Project
8
AMP
3
community
1
LungMap
Genome assembly (visualization)
4
GRCh38
4
hg19
Lab
8
AMP-T2D consortium
3
Anna Gloyn, Oxford
1
Xin Sun, UCSD
Audit category:
1
inconsistent assembly
files.file_type!
bed bed3
replicates.library.biosample.donor.organism.scientific_name!
Homo sapiens
target.investigated_as!
narrow histone mark
assay_title!
CRISPRi RNA-seq
BIOSAMPLE
ASSAY
12 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
CRISPR RNA-seq
CRISPR genome editing followed by sgRNA sequencing
MPRA
RNA microarray
shRNA RNA-seq
siRNA RNA-seq
snATAC-seq
tissue
pancreas
5
lung
1
subcutaneous adipose tissue
1
cell line
EndoC-BH1
1
1
EndoC_BH1
1
MIN6
1
stem cell
SB Ad3.1
1
Download