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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
ChIP-seq
4
DNase-seq
4
pCHi-C
Assay category
32
DNA accessibility
19
Transcription
Date released
31
February, 2023
19
October, 2019
4
June, 2019
1
February, 2020
Available data
31
bed narrowPeak
5
tsv
4
bam
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
4
bigWig
bed bedMethyl
1
bigBed bedMethyl
Organism
55
Homo sapiens
Biosample type
54
tissue
1
primary cell
Organ
722
pancreas
528
connective tissue
416
adipose tissue
389
epithelium
298
kidney
251
heart
236
liver
159
bone element
132
vasculature
130
blood vessel
107
artery
66
brain
55
eye
55
limb
53
musculature of body
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
vein
3
spleen
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
55
AMP
Genome assembly (visualization)
31
hg19
4
GRCh38
Lab
55
AMP-T2D consortium
files.file_type!
bed bedMethyl
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
55 results
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ATAC-seq
total RNA-seq
DNase-seq
pCHi-C
tissue
retina
15
3
3
islet of Langerhans
1
14
4
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
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