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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
2
Hi-C
1
ATAC-seq
Assay category
14
DNA binding
2
3D chromatin structure
1
DNA accessibility
Target of assay
11
transcription factor
3
histone
3
histone modification
2
narrow histone mark
1
RNA binding protein
1
broad histone mark
Date released
15
August, 2021
2
March, 2019
Available data
14
bed narrowPeak
14
bigWig
2
hic
1
bedpe
1
bedpe bed3+
Organism
17
Homo sapiens
Biosample type
15
cell line
2
tissue
Organ
15
liver
2
pancreas
Project
17
AMP
Genome assembly (visualization)
17
hg19
1
GRCh38
Lab
2506
AMP-T2D consortium
23
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
17
Bing Ren, UCSD
7
Struan F.A. Grant, CHOP
1
Katalin Susztak, Upenn
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
files.file_type!
bed bedMethyl
biosample_type!
primary cell
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
Hi-C
ATAC-seq
cell line
HepG2
14
1
tissue
islet of Langerhans
1
1
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