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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
36
DNase-seq
8
ATAC-seq
4
total RNA-seq
Assay category
65
DNA binding
44
DNA accessibility
4
Transcription
Target of assay
48
histone
48
histone modification
34
broad histone mark
17
control
14
narrow histone mark
Date released
68
October, 2019
32
June, 2019
7
May, 2019
6
February, 2021
Available data
114
bam
92
bed narrowPeak
91
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
bed bedMethyl
1
bigBed bedMethyl
Organism
113
Homo sapiens
Biosample type
113
tissue
Organ
685
pancreas
680
liver
591
connective tissue
440
adipose tissue
317
epithelium
243
brain
205
heart
184
vasculature
179
blood vessel
144
kidney
113
limb
102
artery
66
bone element
60
blood
60
bodily fluid
56
musculature of body
42
nerve
36
embryo
22
spleen
20
vein
18
ureter
8
skeleton
7
eye
1
pericardium
1
pituitary gland
Project
113
AMP
Genome assembly (visualization)
96
hg19
95
GRCh38
Lab
113
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bed bedMethyl
files.file_type!!
bed bedMethyl
BIOSAMPLE
ASSAY
113 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
tissue
tibial nerve
35
2
1
4
tibial artery
23
2
1
muscle of leg
7
13
muscle of arm
17
distal epiphysis of femur
1
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