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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
8
ATAC-seq
7
total RNA-seq
4
Hi-C
Assay category
18
DNA binding
8
DNA accessibility
7
Transcription
4
3D chromatin structure
Target of assay
17
control
1
histone
1
histone modification
1
narrow histone mark
Date released
23
October, 2019
6
February, 2021
4
July, 2019
3
February, 2020
1
May, 2019
Available data
114
bam
92
bed narrowPeak
91
bigWig
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
bed bedMethyl
1
bigBed bedMethyl
Organism
37
Homo sapiens
Biosample type
37
tissue
Organ
848
pancreas
648
connective tissue
477
adipose tissue
442
epithelium
427
liver
288
heart
244
kidney
158
bone element
155
brain
150
vasculature
149
blood vessel
116
artery
50
eye
44
musculature of body
37
embryo
37
limb
19
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
9
spleen
9
vein
4
gonad
4
ovary
2
pituitary gland
1
lymph node
1
pericardium
1
skin of body
1
spinal cord
Project
37
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
37
AMP-T2D consortium
files.file_type!
bed bedMethyl
bigBed narrowPeak
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
37 results
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ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
tibial nerve
11
1
5
tibial artery
5
1
1
gastrocnemius medialis
1
4
distal epiphysis of femur
1
distal epiphysis of humerus
1
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