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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
8
ATAC-seq
total RNA-seq
4
Hi-C
Assay category
18
DNA binding
8
DNA accessibility
4
3D chromatin structure
Target of assay
17
control
1
histone
1
histone modification
1
narrow histone mark
Date released
19
October, 2019
6
February, 2021
4
July, 2019
1
May, 2019
Available data
110
bam
92
bed narrowPeak
87
bigWig
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
bed bedMethyl
1
bigBed bedMethyl
Organism
30
Homo sapiens
Biosample type
30
tissue
Organ
452
pancreas
311
epithelium
241
liver
219
heart
186
kidney
179
connective tissue
140
brain
97
bone element
90
vasculature
89
blood vessel
81
adipose tissue
60
artery
39
musculature of body
35
eye
30
limb
23
embryo
20
lung
15
blood
15
bodily fluid
12
nerve
12
skeleton
10
spleen
9
vein
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
30
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
30
AMP-T2D consortium
files.file_type!
bed bedMethyl
bigBed narrowPeak
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
ATAC-seq
Hi-C
tissue
tibial nerve
11
1
tibial artery
5
1
gastrocnemius medialis
4
distal epiphysis of femur
1
distal epiphysis of humerus
1
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