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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
snATAC-seq
5
total RNA-seq
3
single cell RNA-seq
2
RNA microarray
Assay category
16
DNA accessibility
8
Transcription
Date released
715
February, 2021
399
May, 2021
363
August, 2017
341
May, 2020
319
August, 2021
244
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
94
November, 2017
83
July, 2019
64
March, 2020
61
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
44
December, 2017
40
May, 2024
39
February, 2018
31
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
May, 2023
15
November, 2020
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
8
November, 2018
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
9
tsv
5
bam
5
bigWig
Organism
26
Homo sapiens
Biosample type
13
primary cell
11
tissue
2
in vitro differentiated cells
Organ
8
blood
8
bodily fluid
8
pancreas
6
epithelium
5
liver
3
kidney
Project
16
T1D
10
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
16
Kyle Gaulton, UCSD
10
AMP-T2D consortium
Audit category:
4
audit script error
2
inconsistent ontology term
files.file_type!
bed bedMethyl
bigBed narrowPeak
BIOSAMPLE
ASSAY
26 results
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Clear Filters
snATAC-seq
total RNA-seq
single cell RNA-seq
RNA microarray
primary cell
peripheral blood mononuclear cell
8
hepatocyte
5
tissue
islet of Langerhans
4
pancreas
4
kidney
1
kidney interstitium
1
renal glomerulus
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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