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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
18
small RNA-seq
8
Hi-C
6
ATAC-seq
4
WGBS
3
single cell RNA-seq
Assay category
65
Transcription
8
3D chromatin structure
6
DNA accessibility
4
DNA methylation
Target of assay
3
control
Date released
715
February, 2021
399
May, 2021
363
August, 2017
341
May, 2020
319
August, 2021
244
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
94
November, 2017
83
July, 2019
64
March, 2020
61
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
44
December, 2017
39
February, 2018
31
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
May, 2023
15
November, 2020
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
8
November, 2018
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
85
bigWig
82
bam
65
tsv
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
bigBed narrowPeak
Organism
83
Homo sapiens
Biosample type
61
tissue
22
primary cell
Organ
17
connective tissue
17
heart
15
brain
12
adipose tissue
10
blood vessel
10
vasculature
9
liver
8
musculature of body
7
epithelium
6
kidney
4
limb
4
pancreas
3
artery
1
pericardium
Project
83
AMP
Genome assembly (visualization)
74
hg19
71
GRCh38
Lab
83
AMP-T2D consortium
files.file_type!
bed bedMethyl
bigBed narrowPeak
BIOSAMPLE
ASSAY
83 results
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total RNA-seq
small RNA-seq
Hi-C
ATAC-seq
WGBS
single cell RNA-seq
tissue
heart left ventricle
2
2
2
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
+ See 18 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
+ See 14 more…
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