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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
237
histone
237
histone modification
122
broad histone mark
115
narrow histone mark
32
control
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
13
August, 2017
8
June, 2019
July, 2019
3
May, 2021
3
November, 2017
3
October, 2019
1
August, 2021
1
May, 2019
Available data
29
bam
16
fastq
7
bigWig
2
tagAlign
Organism
32
Homo sapiens
Biosample type
187
tissue
83
cell line
37
in vitro differentiated cells
32
primary cell
1
stem cell
Organ
21
epithelium
12
pancreas
4
vasculature
3
blood vessel
3
brain
3
connective tissue
3
kidney
2
heart
2
musculature of body
2
vein
1
eye
1
liver
Project
32
AMP
Genome assembly (visualization)
7
hg19
Lab
29
AMP-T2D consortium
3
Kyle Gaulton, UCSD
Audit category:
5
inconsistent ontology term
files.file_type!
bed bedMethyl
month_released!
July, 2019
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
CD8-positive, alpha-beta T cell
3
cardiac fibroblast
2
endothelial cell of umbilical vein
2
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