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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
289
total RNA-seq
8
single cell RNA-seq
2
small RNA-seq
Assay category
299
Transcription
153
DNA binding
83
DNA accessibility
5
3D chromatin structure
Date released
126
July, 2018
89
August, 2017
37
May, 2021
19
November, 2019
8
April, 2018
6
May, 2022
5
February, 2023
4
July, 2019
3
March, 2020
1
August, 2021
1
February, 2020
Available data
285
bam
281
tsv
279
bigWig
110
fastq
6
txt
Organism
299
Homo sapiens
Biosample type
291
tissue
8
primary cell
Organ
481
connective tissue
479
pancreas
401
adipose tissue
epithelium
193
liver
166
heart
125
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
19
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
292
AMP
7
T1D
Genome assembly (visualization)
279
GRCh38
279
hg19
Lab
286
AMP-T2D consortium
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
4
inconsistent ontology term
files.file_type!
bed bedMethyl
organ_slims!
epithelium
BIOSAMPLE
ASSAY
299 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
islet of Langerhans
284
body of pancreas
3
2
pancreas
2
primary cell
pancreatic stellate cell
4
co-expressing pancreatic endocrine cell
2
unclassified pancreatic endocrine cell
2
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