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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
125
total RNA-seq
2
pCHi-C
2
single cell RNA-seq
Assay category
127
Transcription
Date released
77
May, 2021
22
February, 2021
15
February, 2018
7
August, 2021
4
March, 2020
2
December, 2019
2
October, 2019
Available data
267
bam
239
bigWig
129
tsv
122
fastq
114
bed narrowPeak
37
tagAlign
25
bed bed3+
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
4
hic
3
bigBed narrowPeak
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
129
Homo sapiens
Biosample type
1073
tissue
154
primary cell
129
in vitro differentiated cells
84
cell line
4
stem cell
Organ
6
embryo
5
connective tissue
epithelium
1
heart
Project
129
AMP
Genome assembly (visualization)
125
GRCh38
125
hg19
Lab
129
AMP-T2D consortium
Audit category:
89
inconsistent ontology term
2
audit script error
files.file_type!
bed bedMethyl
organ_slims!
epithelium
BIOSAMPLE
ASSAY
129 results
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total RNA-seq
pCHi-C
single cell RNA-seq
in vitro differentiated cells
cardiomyocytes
59
cardiac precursors (cardiac muscle cell)
19
induced pluripotent stem cell
9
neural progenitor cell
7
cardiomyocytes (cardiac muscle cell)
3
1
2
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