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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
total RNA-seq
16
small RNA-seq
6
ATAC-seq
4
Hi-C
4
WGBS
3
single cell RNA-seq
2
FAIRE-seq
Assay category
61
Transcription
8
DNA accessibility
4
3D chromatin structure
4
DNA methylation
Target of assay
3
control
Date released
715
February, 2021
406
November, 2017
399
May, 2021
381
August, 2017
341
May, 2020
319
August, 2021
314
October, 2019
205
February, 2023
198
May, 2022
175
June, 2019
168
July, 2018
113
May, 2019
94
December, 2017
81
November, 2018
80
April, 2019
77
July, 2019
76
October, 2018
73
September, 2018
61
November, 2019
59
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
80
bigWig
77
bam
61
tsv
bed bedMethyl
21
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
77
Homo sapiens
Biosample type
57
tissue
20
primary cell
Organ
17
connective tissue
17
heart
16
brain
12
adipose tissue
10
blood vessel
10
vasculature
9
liver
musculature of body
7
epithelium
7
kidney
4
limb
4
pancreas
3
artery
1
pericardium
Project
77
AMP
Genome assembly (visualization)
72
hg19
67
GRCh38
Lab
77
AMP-T2D consortium
files.file_type!
bed bedMethyl
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
77 results
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total RNA-seq
small RNA-seq
ATAC-seq
Hi-C
WGBS
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
2
2
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
+ See 17 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
+ See 13 more…
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