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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
13
DNA binding
2
DNA accessibility
Target of assay
7
control
6
transcription factor
3
other context
3
other post-translational modification
Date released
7
December, 2018
January, 2019
7
November, 2018
1
March, 2020
1
October, 2017
Available data
17
bam
17
fastq
10
bigWig
8
bed narrowPeak
7
bigBed narrowPeak
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
16
Homo sapiens
Biosample type
16
tissue
Organ
940
pancreas
783
liver
681
connective tissue
518
epithelium
489
adipose tissue
350
kidney
345
heart
284
brain
234
vasculature
229
blood vessel
159
bone element
141
artery
121
limb
92
musculature of body
60
eye
51
blood
51
bodily fluid
43
nerve
37
embryo
22
vein
20
lung
18
ureter
16
skeleton
16
spleen
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
16
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
16
AMP-T2D consortium
files.file_type!
bed bedMethyl
month_released!
January, 2019
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
13
1
1
1
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