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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
Assay category
19
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
24
histone
24
histone modification
broad histone mark
11
control
8
narrow histone mark
Date released
26
October, 2019
1
February, 2020
Available data
26
bam
15
bigWig
11
bed narrowPeak
10
bigBed narrowPeak
5
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
27
Homo sapiens
Biosample type
27
tissue
Organ
862
pancreas
746
liver
637
connective tissue
474
epithelium
469
adipose tissue
335
kidney
308
heart
214
brain
189
vasculature
184
blood vessel
159
bone element
127
artery
87
limb
72
musculature of body
69
blood
69
bodily fluid
60
eye
33
embryo
27
nerve
20
lung
19
spleen
18
ureter
16
skeleton
13
vein
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
27
AMP
Genome assembly (visualization)
15
GRCh38
15
hg19
Lab
27
AMP-T2D consortium
files.file_type!
bed bedMethyl
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
27 results
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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
19
5
2
1
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