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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
2
DNase-seq
Assay category
12
DNA binding
2
DNA accessibility
Target of assay
11
histone
11
histone modification
6
broad histone mark
5
narrow histone mark
2
RNA binding protein
2
transcription factor
chromatin remodeller
Date released
187
June, 2019
60
November, 2017
14
August, 2017
9
November, 2018
9
October, 2019
1
November, 2020
Available data
284
fastq
279
bam
269
bigWig
139
bed narrowPeak
89
tsv
85
tagAlign
41
bigBed narrowPeak
40
bed broadPeak
33
bed bed3+
14
bigBed broadPeak
bed bedMethyl
6
bigBed bedMethyl
Organism
14
Homo sapiens
Biosample type
13
primary cell
1
in vitro differentiated cells
Organ
1
connective tissue
Project
14
AMP
Genome assembly (visualization)
14
hg19
12
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
1
inconsistent assembly
files.file_type!
bed bedMethyl
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
DNase-seq
primary cell
skeletal muscle myoblast
12
1
in vitro differentiated cells
adipocyte
1
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