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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
14
DNA binding
2
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
7
January, 2019
4
December, 2018
4
November, 2018
1
March, 2020
1
October, 2017
Available data
18
bam
18
fastq
10
bigWig
8
bed narrowPeak
7
bigBed narrowPeak
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
17
Homo sapiens
Biosample type
17
tissue
Organ
921
pancreas
641
connective tissue
509
epithelium
472
adipose tissue
450
liver
340
kidney
333
heart
281
brain
225
vasculature
221
blood vessel
159
bone element
136
artery
121
limb
92
musculature of body
59
eye
43
nerve
34
embryo
22
vein
20
lung
18
blood
18
bodily fluid
18
ureter
17
spleen
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
17
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
17
AMP-T2D consortium
files.file_type!
bed bedMethyl
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
14
1
1
1
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