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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
36
DNase-seq
8
ATAC-seq
total RNA-seq
4
Hi-C
Assay category
66
DNA binding
44
DNA accessibility
4
3D chromatin structure
DNA methylation
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
65
October, 2019
32
June, 2019
7
May, 2019
6
February, 2021
4
July, 2019
Available data
109
bam
92
bed narrowPeak
86
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
Organism
114
Homo sapiens
Biosample type
114
tissue
Organ
595
liver
496
pancreas
340
epithelium
311
heart
290
kidney
267
brain
199
connective tissue
172
vasculature
167
blood vessel
114
limb
97
bone element
87
adipose tissue
85
artery
84
musculature of body
69
blood
69
bodily fluid
41
eye
38
nerve
23
embryo
23
spleen
22
vein
20
lung
18
ureter
12
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
114
AMP
Genome assembly (visualization)
92
hg19
91
GRCh38
Lab
114
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bed bedgraph
assay_slims!
DNA methylation
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
114 results
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ChIP-seq
DNase-seq
ATAC-seq
Hi-C
tissue
tibial nerve
35
2
1
tibial artery
23
2
1
muscle of leg
7
13
muscle of arm
17
gastrocnemius medialis
4
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