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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
pCHi-C
Assay category
35
DNA binding
Transcription
3
DNA accessibility
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
38
October, 2019
1
March, 2020
Available data
38
bam
27
bed narrowPeak
27
bigWig
26
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
tsv
Organism
39
Homo sapiens
Biosample type
39
tissue
Organ
598
liver
467
pancreas
323
epithelium
262
brain
229
kidney
227
heart
199
connective tissue
169
vasculature
163
blood vessel
115
limb
97
bone element
90
adipose tissue
87
musculature of body
83
artery
69
blood
69
bodily fluid
42
eye
38
nerve
25
spleen
23
embryo
22
vein
18
ureter
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
39
AMP
Genome assembly (visualization)
27
GRCh38
27
hg19
Lab
39
AMP-T2D consortium
files.file_type!
bed bedgraph
assay_slims!
Transcription
BIOSAMPLE
ASSAY
39 results
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ChIP-seq
DNase-seq
ATAC-seq
pCHi-C
tissue
tibial nerve
35
2
1
esophagus
1
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