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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
137
total RNA-seq
123
ChIP-seq
5
ATAC-seq
Assay category
137
Transcription
123
DNA binding
5
DNA accessibility
Target of assay
116
histone
116
histone modification
64
broad histone mark
52
narrow histone mark
4
transcription factor
3
control
Date released
277
November, 2017
265
May, 2021
107
February, 2021
94
August, 2017
90
May, 2020
72
September, 2018
57
November, 2018
48
July, 2018
47
August, 2021
47
June, 2019
47
October, 2019
43
April, 2018
36
December, 2017
31
February, 2018
27
December, 2018
22
July, 2019
20
January, 2019
12
November, 2019
9
March, 2020
7
August, 2020
6
January, 2018
5
December, 2019
5
November, 2020
5
September, 2017
4
May, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
October, 2018
Available data
265
bigWig
239
bam
135
tsv
133
bed narrowPeak
90
tagAlign
2
bed bed3+
Organism
265
Homo sapiens
Biosample type
171
primary cell
89
in vitro differentiated cells
tissue
5
cell line
Organ
9
epithelium
7
pancreas
2
embryo
1
connective tissue
1
heart
Project
136
T1D
129
AMP
Genome assembly (visualization)
265
hg19
225
GRCh38
Lab
175
Kyle Gaulton, UCSD
90
AMP-T2D consortium
Audit category:
73
inconsistent ontology term
files.file_type!
bed bedgraph
biosample_type!
tissue
BIOSAMPLE
ASSAY
265 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
primary cell
monocyte
51
84
CD8-positive, alpha-beta T cell
2
33
embryonic stem cell
1
in vitro differentiated cells
cardiomyocytes
59
3
induced pluripotent stem cell
9
embryonic stem cell
5
pancreatic PP cell
2
cardiac fibroblast
1
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cell line
EndoC_BH1
4
1
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