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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
11
ChIP-seq
9
ATAC-seq
2
DNase-seq
Assay category
54
Transcription
11
DNA accessibility
11
DNA binding
Target of assay
5
transcription factor
4
control
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
Date released
66
February, 2021
October, 2019
5
May, 2019
3
July, 2019
2
June, 2019
Available data
76
bam
64
bigWig
58
tsv
53
bed narrowPeak
6
tagAlign
5
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
76
Homo sapiens
Biosample type
66
cell line
8
tissue
2
primary cell
Organ
675
pancreas
674
liver
593
connective tissue
442
adipose tissue
285
epithelium
204
heart
160
brain
139
vasculature
134
blood vessel
116
kidney
76
artery
66
bone element
60
blood
60
bodily fluid
57
musculature of body
46
limb
36
embryo
24
spleen
18
ureter
8
skeleton
7
eye
1
pericardium
Project
76
AMP
Genome assembly (visualization)
72
GRCh38
72
hg19
Lab
76
AMP-T2D consortium
files.file_type!
bed bedgraph
month_released!
October, 2019
BIOSAMPLE
ASSAY
76 results
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total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
6
8
tissue
coronary artery
5
1
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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