Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
395
total RNA-seq
37
ChIP-seq
3
small RNA-seq
2
WGBS
Assay category
398
Transcription
37
DNA binding
DNA accessibility
2
DNA methylation
Target of assay
19
control
17
transcription factor
5
RNA binding protein
1
histone
1
histone modification
1
narrow histone mark
Date released
386
February, 2021
23
October, 2018
16
August, 2017
12
July, 2019
Available data
437
bam
419
bigWig
401
tsv
41
fastq
8
tagAlign
7
bed narrowPeak
6
bigBed narrowPeak
4
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
bed broadPeak
1
bedpe bed3+
Organism
437
Homo sapiens
Biosample type
435
tissue
2
primary cell
Organ
615
liver
608
pancreas
579
connective tissue
437
adipose tissue
269
epithelium
194
brain
169
heart
156
vasculature
155
blood vessel
88
artery
70
limb
64
kidney
60
blood
60
bodily fluid
58
bone element
39
nerve
36
embryo
24
musculature of body
22
spleen
15
vein
3
eye
1
pericardium
1
pituitary gland
Project
437
AMP
Genome assembly (visualization)
418
GRCh38
416
hg19
Lab
437
AMP-T2D consortium
Audit category:
12
missing controlled_by
files.file_type!
bed broadPeak
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
437 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
small RNA-seq
WGBS
tissue
adipose tissue
381
2
2
subcutaneous adipose tissue
6
12
1
omental fat pad
4
11
1
white adipose tissue
12
visceral abdominal adipose tissue
3
primary cell
mesenchymal stem cell of adipose
1
1
Download