Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
34
single cell RNA-seq
26
total RNA-seq
3
Hi-C
1
MPRA
Assay category
DNA accessibility
60
Transcription
41
DNA methylation
3
3D chromatin structure
Date released
666
February, 2021
365
May, 2021
361
August, 2017
336
November, 2017
279
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
14
November, 2020
12
October, 2017
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
74
zippedFastqFolder
7
txt
6
bam
6
fastq
3
bedpe bed3+
3
cool
3
hic
Organism
104
Homo sapiens
Biosample type
77
primary cell
27
tissue
1
cell line
Organ
50
pancreas
44
epithelium
20
liver
1
musculature of body
Project
77
HPAP
28
AMP
Genome assembly (visualization)
3
hg19
Lab
77
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
6
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
3
audit script error
files.file_type!
bed broadPeak
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
105 results
search-icon
table-tab-icon
Clear Filters
WGBS
single cell RNA-seq
total RNA-seq
Hi-C
MPRA
primary cell
Langerhans cell
33
pancreatic alpha cell
25
1
pancreatic beta cell
16
1
pancreatic acinar cell
1
tissue
liver
20
islet of Langerhans
6
skeletal muscle tissue
1
cell line
MIN6
1
Download