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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
323
ChIP-seq
Assay category
323
DNA binding
Target of assay
196
transcription factor
71
control
66
recombinant protein
53
histone
53
histone modification
36
broad histone mark
30
RNA binding protein
17
narrow histone mark
11
chromatin remodeller
1
other context
1
other post-translational modification
Date released
572
February, 2021
323
November, 2017
283
May, 2020
277
May, 2021
261
August, 2017
241
October, 2019
164
July, 2018
120
May, 2019
94
December, 2017
82
July, 2019
79
April, 2019
78
November, 2018
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
31
June, 2019
30
January, 2019
24
May, 2022
16
March, 2020
12
October, 2017
11
September, 2017
5
December, 2019
5
November, 2020
3
August, 2018
3
June, 2018
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
323
Homo sapiens
Biosample type
256
cell line
64
tissue
3
primary cell
Organ
256
liver
67
brain
2
epithelium
2
vasculature
1
blood vessel
Project
323
AMP
Genome assembly (visualization)
225
GRCh38
211
hg19
Lab
323
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
8
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed broadPeak
assay_title!
Capture-C
BIOSAMPLE
ASSAY
323 results
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Clear Filters
ChIP-seq
cell line
HepG2
256
tissue
layer of hippocampus
19
caudate nucleus
13
substantia nigra
12
middle frontal area 46
11
cingulate gyrus
7
+ See 1 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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