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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
45
ATAC-seq
34
ChIP-seq
Assay category
56
Transcription
45
DNA accessibility
34
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
66
February, 2021
35
February, 2023
24
October, 2019
5
May, 2019
3
July, 2019
August, 2021
2
February, 2020
Available data
102
bam
85
bigWig
74
bed narrowPeak
56
tsv
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
bed broadPeak
4
bigBed broadPeak
Organism
135
Homo sapiens
Biosample type
67
tissue
66
cell line
2
primary cell
Organ
919
pancreas
690
liver
666
connective tissue
496
epithelium
484
adipose tissue
270
heart
235
brain
213
vasculature
211
blood vessel
159
bone element
145
kidney
135
artery
86
limb
69
blood
69
bodily fluid
57
eye
48
musculature of body
41
nerve
29
embryo
24
spleen
20
lung
18
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
135
AMP
Genome assembly (visualization)
124
GRCh38
89
hg19
Lab
135
AMP-T2D consortium
files.file_type!
bed broadPeak
assay_title!
small RNA-seq
month_released!
August, 2021
BIOSAMPLE
ASSAY
135 results
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total RNA-seq
ATAC-seq
ChIP-seq
tissue
coronary artery
1
36
5
tibial artery
1
1
23
cell line
smooth muscle cell of the coronary artery
52
8
6
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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