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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
334
ChIP-seq
Assay category
334
DNA binding
Target of assay
197
transcription factor
69
control
66
recombinant protein
65
histone
65
histone modification
40
broad histone mark
30
RNA binding protein
25
narrow histone mark
11
chromatin remodeller
1
other context
1
other post-translational modification
Date released
683
February, 2021
373
May, 2021
341
August, 2017
341
May, 2020
334
November, 2017
313
August, 2021
274
October, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
80
April, 2019
79
November, 2018
77
July, 2019
75
December, 2017
74
October, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
25
June, 2019
19
April, 2020
19
October, 2017
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
9
November, 2020
8
January, 2018
6
September, 2017
5
March, 2023
4
December, 2019
4
March, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
386
bam
328
bigWig
318
fastq
309
bed narrowPeak
308
bigBed narrowPeak
78
tagAlign
bed broadPeak
60
bigBed broadPeak
3
tar
Organism
334
Homo sapiens
Biosample type
257
cell line
76
tissue
1
primary cell
Organ
257
liver
79
brain
epithelium
2
vasculature
1
blood vessel
Project
334
AMP
Genome assembly (visualization)
225
GRCh38
209
hg19
Lab
334
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
8
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed broadPeak
assay_title!
small RNA-seq
organ_slims!
epithelium
BIOSAMPLE
ASSAY
334 results
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Clear Filters
ChIP-seq
cell line
HepG2
257
tissue
layer of hippocampus
22
caudate nucleus
14
substantia nigra
14
cingulate gyrus
12
middle frontal area 46
12
+ See 1 more…
primary cell
astrocyte of the cerebellum
1
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