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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
23
ChIP-seq
8
ATAC-seq
4
Hi-C
1
FAIRE-seq
1
RRBS
Assay category
23
DNA binding
Target of assay
13
histone
13
histone modification
7
broad histone mark
6
control
6
narrow histone mark
4
transcription factor
Date released
15
October, 2019
6
February, 2021
2
November, 2017
Available data
29
bam
22
bigWig
18
bed narrowPeak
14
bigBed narrowPeak
bed broadPeak
6
bigBed broadPeak
6
fastq
6
tagAlign
Organism
23
Homo sapiens
Biosample type
tissue
17
primary cell
6
cell line
Organ
339
liver
123
epithelium
101
pancreas
79
connective tissue
60
blood
60
bodily fluid
25
kidney
23
vasculature
22
blood vessel
22
embryo
15
vein
11
heart
10
musculature of body
6
artery
3
brain
3
eye
Project
23
AMP
Genome assembly (visualization)
16
hg19
14
GRCh38
Lab
23
AMP-T2D consortium
files.file_type!
bed broadPeak
biosample_type!
tissue
BIOSAMPLE
ASSAY
23 results
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Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein
15
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
cell line
smooth muscle cell of the coronary artery
6
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