Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1594
ChIP-seq
1402
total RNA-seq
426
ATAC-seq
293
single cell RNA-seq
86
RNA microarray
84
snATAC-seq
57
pCHi-C
28
WGBS
26
Hi-C
18
small RNA-seq
15
RRBS
5
GRO-seq
5
STARR-seq
4
FAIRE-seq
4
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
3
DNase-seq
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
3
DNA accessibility
Date released
3
August, 2017
Available data
192
bam
192
bed narrowPeak
192
bigBed narrowPeak
192
bigWig
bed broadPeak
190
bigBed broadPeak
188
bed bed3+
12
fastq
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Organ
epithelium
3
kidney
1
liver
1
pancreas
Project
3
AMP
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
3
AMP-T2D consortium
files.file_type!
bed broadPeak
organ_slims!
epithelium
BIOSAMPLE
ASSAY
3 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
tissue
islet of Langerhans
1
right lobe of liver
1
primary cell
skeletal muscle myoblast
1
Download