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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ChIP-seq
Assay category
71
DNA binding
Target of assay
364
transcription factor
270
histone
270
histone modification
140
broad histone mark
129
narrow histone mark
126
control
89
recombinant protein
71
RNA binding protein
28
chromatin remodeller
1
other context
1
other post-translational modification
Date released
30
November, 2017
21
November, 2018
6
January, 2019
5
May, 2021
4
August, 2017
2
December, 2018
2
June, 2019
1
August, 2021
Available data
72
bam
71
bed narrowPeak
71
bigWig
70
fastq
66
bigBed narrowPeak
bed broadPeak
7
bigBed broadPeak
1
tar
Organism
71
Homo sapiens
Biosample type
60
cell line
tissue
9
in vitro differentiated cells
2
primary cell
Organ
52
liver
10
blood
10
bodily fluid
epithelium
5
connective tissue
2
kidney
1
eye
1
heart
1
pancreas
Project
71
AMP
Genome assembly (visualization)
63
hg19
60
GRCh38
Lab
65
AMP-T2D consortium
5
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
4
inconsistent control read length
3
inconsistent control run_type
files.file_type!
bed broadPeak
biosample_type!
tissue
organ_slims!
epithelium
BIOSAMPLE
ASSAY
71 results
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Clear Filters
ChIP-seq
cell line
HepG2
50
GM12878
10
in vitro differentiated cells
embryonic stem cell
5
adipocyte
4
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
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