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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
8
ATAC-seq
4
total RNA-seq
1
WGBS
Assay category
65
DNA binding
8
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
48
histone
48
histone modification
34
broad histone mark
17
control
14
narrow histone mark
Date released
64
October, 2019
7
May, 2019
6
February, 2021
1
July, 2019
Available data
114
bam
92
bed narrowPeak
91
bigWig
84
bigBed narrowPeak
36
bed bed3+
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
78
Homo sapiens
Biosample type
78
tissue
Organ
675
pancreas
618
liver
584
connective tissue
440
adipose tissue
295
epithelium
197
brain
181
heart
168
vasculature
167
blood vessel
98
artery
78
limb
66
bone element
66
kidney
60
blood
60
bodily fluid
40
nerve
36
embryo
24
musculature of body
23
spleen
16
vein
8
skeleton
3
eye
1
pericardium
1
pituitary gland
Project
78
AMP
Genome assembly (visualization)
60
GRCh38
60
hg19
Lab
78
AMP-T2D consortium
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
78 results
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ChIP-seq
ATAC-seq
total RNA-seq
WGBS
tissue
tibial nerve
35
1
4
tibial artery
23
1
muscle of leg
7
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
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