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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
771
ChIP-seq
243
total RNA-seq
128
single cell RNA-seq
59
ATAC-seq
27
snATAC-seq
17
WGBS
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
DNase-seq
1
Hi-C
1
pCHi-C
Assay category
59
DNA accessibility
Date released
18
May, 2022
14
September, 2018
7
August, 2020
7
October, 2017
5
August, 2017
5
September, 2017
3
September, 2020
Available data
278
bed narrowPeak
175
bam
136
bigWig
64
xls
61
fastq
39
zippedFastqFolder
27
bigBed narrowPeak
14
tsv
12
bed bed3
7
bed bedgraph
4
bed bed3+
3
txt
bed broadPeak
Organism
59
Homo sapiens
Biosample type
32
primary cell
27
tissue
Organ
54
pancreas
32
epithelium
2
adipose tissue
2
connective tissue
1
brain
1
liver
1
spleen
Project
49
AMP
10
HPAP
Genome assembly (visualization)
48
hg19
41
GRCh38
Lab
31
AMP-T2D consortium
18
Kyle Gaulton, UCSD
10
Klaus Kaestner, Upenn
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
59 results
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ATAC-seq
primary cell
pancreatic alpha cell
13
pancreatic beta cell
10
pancreatic acinar cell
5
pancreatic ductal cell
4
tissue
islet of Langerhans
18
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
right lobe of liver
1
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