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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
363
ChIP-seq
237
total RNA-seq
134
single cell RNA-seq
35
ATAC-seq
27
snATAC-seq
17
WGBS
5
GRO-seq
4
RRBS
1
Hi-C
1
pCHi-C
Assay category
35
DNA accessibility
Date released
18
May, 2022
7
August, 2020
7
October, 2017
3
September, 2020
Available data
278
bed narrowPeak
175
bam
136
bigWig
64
xls
61
fastq
39
zippedFastqFolder
bigBed narrowPeak
14
tsv
12
bed bed3
7
bed bedgraph
4
bed bed3+
3
txt
bed broadPeak
Organism
35
Homo sapiens
Biosample type
25
tissue
10
primary cell
Organ
32
pancreas
10
epithelium
1
adipose tissue
1
brain
1
connective tissue
1
spleen
Project
25
AMP
10
HPAP
Genome assembly (visualization)
24
hg19
17
GRCh38
Lab
18
Kyle Gaulton, UCSD
10
Klaus Kaestner, Upenn
7
AMP-T2D consortium
files.file_type!
bed broadPeak
bigBed narrowPeak
BIOSAMPLE
ASSAY
35 results
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ATAC-seq
tissue
islet of Langerhans
18
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
spleen
1
primary cell
pancreatic alpha cell
7
pancreatic beta cell
3
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