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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
260
ChIP-seq
Assay category
260
DNA binding
Target of assay
197
transcription factor
66
recombinant protein
59
control
30
RNA binding protein
11
chromatin remodeller
1
histone
1
histone modification
1
narrow histone mark
1
other context
1
other post-translational modification
Date released
359
May, 2021
260
November, 2017
148
May, 2020
125
February, 2021
112
August, 2017
90
August, 2021
73
September, 2018
67
October, 2019
62
November, 2018
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
34
February, 2023
31
July, 2019
31
June, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
11
November, 2020
8
January, 2021
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
3
June, 2018
2
October, 2018
1
October, 2022
Available data
324
fastq
323
bam
277
bigWig
255
bed narrowPeak
255
bigBed narrowPeak
bed broadPeak
64
bigBed broadPeak
12
tagAlign
3
tar
Organism
260
Homo sapiens
Biosample type
257
cell line
tissue
3
primary cell
Organ
257
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
260
AMP
Genome assembly (visualization)
211
hg19
173
GRCh38
Lab
260
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
8
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed broadPeak
lab.title!
Klaus Kaestner, Upenn
biosample_type!
tissue
BIOSAMPLE
ASSAY
260 results
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Clear Filters
ChIP-seq
cell line
HepG2
257
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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