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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
14
total RNA-seq
5
ChIP-seq
4
pCHi-C
1
RRBS
Assay category
28
DNA accessibility
14
Transcription
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
27
February, 2023
21
October, 2019
3
June, 2019
1
July, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
tsv
4
bed bed3+
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
52
Homo sapiens
Biosample type
48
tissue
4
primary cell
Organ
554
liver
508
pancreas
346
epithelium
251
kidney
213
brain
196
connective tissue
195
heart
151
vasculature
149
blood vessel
101
bone element
87
adipose tissue
79
artery
79
limb
69
blood
69
bodily fluid
52
eye
41
musculature of body
36
nerve
23
embryo
23
spleen
19
lung
18
vein
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
52
AMP
Genome assembly (visualization)
30
hg19
2
GRCh38
Lab
52
AMP-T2D consortium
files.file_type!
bed broadPeak
tsv
month_released!
December, 2019
BIOSAMPLE
ASSAY
52 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
pCHi-C
RRBS
tissue
islet of Langerhans
1
14
2
4
retina
15
pigmented layer of retina
12
primary cell
retinal pigment epithelial cell
3
1
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