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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
Assay category
36
DNA binding
Target of assay
34
histone
34
histone modification
18
broad histone mark
16
narrow histone mark
2
chromatin remodeller
2
transcription factor
Date released
32
September, 2018
November, 2017
2
November, 2018
1
August, 2017
1
October, 2017
Available data
79
fastq
78
bam
76
bigWig
38
bed narrowPeak
14
bed bed3+
5
bigBed narrowPeak
4
tagAlign
bed broadPeak
Organism
36
Homo sapiens
Biosample type
32
primary cell
2
cell line
2
tissue
Organ
33
pancreas
21
epithelium
2
liver
1
brain
Project
36
AMP
Genome assembly (visualization)
36
GRCh38
36
hg19
Lab
36
AMP-T2D consortium
Audit category:
36
missing controlled_by
Audit category:
2
inconsistent control read length
2
inconsistent control run_type
files.file_type!
bed broadPeak
month_released!
November, 2017
BIOSAMPLE
ASSAY
36 results
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ChIP-seq
primary cell
pancreatic ductal cell
13
pancreatic endocrine cell
11
pancreatic acinar cell
8
cell line
HepG2
2
tissue
brain
1
islet of Langerhans
1
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