Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
26
total RNA-seq
14
ATAC-seq
Assay category
63
DNA binding
26
Transcription
14
DNA accessibility
Target of assay
51
histone
51
histone modification
26
narrow histone mark
25
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
572
February, 2021
323
November, 2017
283
May, 2020
277
May, 2021
261
August, 2017
241
October, 2019
164
July, 2018
120
May, 2019
94
December, 2017
82
July, 2019
79
April, 2019
78
November, 2018
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
31
June, 2019
30
January, 2019
24
May, 2022
16
March, 2020
12
October, 2017
11
September, 2017
5
December, 2019
5
November, 2020
3
August, 2018
3
June, 2018
Available data
290
bam
282
bigWig
256
bed narrowPeak
224
bigBed narrowPeak
187
bed bed3+
bed broadPeak
187
bigBed broadPeak
73
fastq
26
tsv
1
csv
Organism
103
Homo sapiens
Biosample type
103
primary cell
Organ
72
pancreas
67
epithelium
12
connective tissue
10
musculature of body
5
heart
3
eye
3
kidney
Project
103
AMP
Genome assembly (visualization)
95
GRCh38
95
hg19
Lab
103
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
Audit category:
32
missing controlled_by
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
103 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 7 more…
See all biosamples
Download