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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
225
ChIP-seq
4
total RNA-seq
1
ATAC-seq
Assay category
225
DNA binding
4
Transcription
1
DNA accessibility
Target of assay
169
transcription factor
66
recombinant protein
53
histone
53
histone modification
36
broad histone mark
25
RNA binding protein
17
narrow histone mark
9
chromatin remodeller
1
other context
1
other post-translational modification
Date released
568
February, 2021
276
May, 2021
230
August, 2017
225
November, 2017
207
May, 2020
200
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
77
December, 2017
72
September, 2018
70
November, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
23
June, 2019
16
March, 2020
12
May, 2023
10
October, 2017
7
August, 2020
7
September, 2017
5
December, 2019
5
November, 2020
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
286
bam
284
bigWig
282
bed narrowPeak
281
bigBed narrowPeak
223
fastq
bed broadPeak
54
tagAlign
51
bigBed broadPeak
4
tsv
1
bed bed3+
Organism
230
Homo sapiens
Biosample type
173
cell line
52
tissue
5
primary cell
Organ
173
liver
52
brain
5
connective tissue
Project
230
AMP
Genome assembly (visualization)
230
GRCh38
216
hg19
Lab
230
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
2
inconsistent control run_type
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
230 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
cell line
HepG2
173
tissue
layer of hippocampus
16
caudate nucleus
11
substantia nigra
10
middle frontal area 46
9
cingulate gyrus
5
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primary cell
osteoblast
4
1
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