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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
271
ChIP-seq
Assay category
271
DNA binding
Target of assay
197
transcription factor
71
control
66
recombinant protein
65
histone
histone modification
40
broad histone mark
30
RNA binding protein
25
narrow histone mark
11
chromatin remodeller
1
other context
1
other post-translational modification
Date released
715
February, 2021
314
May, 2020
299
August, 2021
271
November, 2017
259
May, 2021
208
August, 2017
205
February, 2023
200
May, 2022
168
July, 2018
111
October, 2019
108
July, 2019
79
November, 2018
63
December, 2017
61
March, 2020
59
September, 2020
51
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
41
September, 2018
35
December, 2018
28
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
12
June, 2019
11
September, 2017
10
December, 2019
10
October, 2017
8
January, 2018
7
August, 2020
5
March, 2023
4
August, 2018
4
March, 2019
4
October, 2022
3
June, 2018
1
August, 2022
Available data
317
bam
306
fastq
259
bigWig
239
bed narrowPeak
239
bigBed narrowPeak
bed broadPeak
47
bigBed broadPeak
11
tagAlign
3
tar
Organism
271
Homo sapiens
Biosample type
256
cell line
12
tissue
3
primary cell
Organ
256
liver
15
brain
2
epithelium
2
vasculature
1
blood vessel
Project
271
AMP
Genome assembly (visualization)
210
hg19
172
GRCh38
Lab
271
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
8
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed broadPeak
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
271 results
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Clear Filters
ChIP-seq
cell line
HepG2
256
tissue
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
middle frontal area 46
2
substantia nigra
2
+ See 1 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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