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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
70
DNA binding
7
DNA methylation
1
DNA accessibility
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
266
August, 2017
260
November, 2017
94
December, 2017
79
November, 2018
76
February, 2023
73
September, 2018
60
October, 2018
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
13
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
Available data
88
fastq
87
bam
80
bigWig
73
bed narrowPeak
73
bigBed narrowPeak
9
bed bed3+
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
79
Homo sapiens
Biosample type
61
cell line
17
tissue
1
primary cell
Organ
50
liver
15
blood
15
bodily fluid
8
spleen
5
pancreas
Project
79
AMP
Genome assembly (visualization)
70
GRCh38
62
hg19
Lab
79
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
79 results
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Clear Filters
ChIP-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
2
liver
4
pancreas
2
1
body of pancreas
2
primary cell
pancreatic cell
1
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