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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
3
single cell RNA-seq
1
pCHi-C
Assay category
31
DNA binding
3
Transcription
Target of assay
14
histone
14
histone modification
9
narrow histone mark
9
transcription factor
8
control
5
broad histone mark
Date released
712
February, 2021
399
May, 2021
316
August, 2017
298
October, 2019
284
August, 2021
205
February, 2023
168
July, 2018
160
May, 2022
147
May, 2020
120
May, 2019
98
July, 2019
80
April, 2019
79
November, 2017
76
October, 2018
73
September, 2018
61
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
34
December, 2018
31
December, 2017
31
June, 2019
29
November, 2018
25
January, 2019
24
February, 2020
19
April, 2020
19
October, 2017
16
January, 2021
15
May, 2023
15
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2023
4
August, 2018
4
March, 2019
4
October, 2022
3
June, 2018
1
August, 2022
Available data
35
fastq
34
bam
25
bigWig
22
bed narrowPeak
15
bed bed3+
3
tsv
1
bedpe bed3+
Organism
35
Homo sapiens
Biosample type
29
in vitro differentiated cells
3
primary cell
3
stem cell
Organ
liver
22
epithelium
13
embryo
3
pancreas
1
adipose tissue
1
connective tissue
Project
35
AMP
Genome assembly (visualization)
30
GRCh38
30
hg19
Lab
35
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
files.file_type!
bed broadPeak
organ_slims!
liver
BIOSAMPLE
ASSAY
35 results
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Clear Filters
ChIP-seq
single cell RNA-seq
pCHi-C
in vitro differentiated cells
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
Hepatic endoderm
4
+ See 1 more…
primary cell
pancreatic alpha cell
2
pancreatic acinar cell
1
stem cell
hESC
3
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