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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
2
single cell RNA-seq
1
ATAC-seq
1
total RNA-seq
Assay category
23
DNA binding
3
Transcription
1
DNA accessibility
Target of assay
18
histone
18
histone modification
14
broad histone mark
5
control
4
narrow histone mark
Date released
24
October, 2019
2
August, 2021
1
February, 2020
Available data
26
bam
21
bed narrowPeak
21
bigWig
20
bigBed narrowPeak
3
tsv
2
bed bed3+
bed broadPeak
2
bigBed broadPeak
Organism
27
Homo sapiens
Biosample type
27
tissue
Organ
925
pancreas
liver
674
connective tissue
502
epithelium
488
adipose tissue
heart
276
kidney
239
brain
219
vasculature
217
blood vessel
159
bone element
137
artery
86
limb
69
blood
69
bodily fluid
57
eye
50
musculature of body
41
nerve
37
embryo
24
spleen
20
lung
18
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
27
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
Lab
27
AMP-T2D consortium
files.file_type!
bed broadPeak
organ_slims!
liver
heart
BIOSAMPLE
ASSAY
27 results
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Clear Filters
ChIP-seq
single cell RNA-seq
ATAC-seq
total RNA-seq
tissue
tibial artery
23
1
1
pulmonary artery
2
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