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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
8
ATAC-seq
4
Hi-C
1
WGBS
Assay category
66
DNA binding
8
DNA accessibility
4
3D chromatin structure
1
DNA methylation
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
61
October, 2019
7
May, 2019
6
February, 2021
5
July, 2019
Available data
114
bam
92
bed narrowPeak
91
bigWig
84
bigBed narrowPeak
36
bed bed3+
bed broadPeak
36
bigBed broadPeak
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
79
Homo sapiens
Biosample type
79
tissue
Organ
554
liver
508
pancreas
346
epithelium
252
kidney
213
brain
196
connective tissue
195
heart
151
vasculature
149
blood vessel
101
bone element
87
adipose tissue
79
artery
79
limb
69
blood
69
bodily fluid
52
eye
41
musculature of body
36
nerve
23
embryo
23
spleen
19
lung
18
vein
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
79
AMP
Genome assembly (visualization)
56
GRCh38
56
hg19
Lab
79
AMP-T2D consortium
files.file_type!
bed broadPeak
tsv
BIOSAMPLE
ASSAY
79 results
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ChIP-seq
ATAC-seq
Hi-C
WGBS
tissue
tibial nerve
35
1
tibial artery
23
1
muscle of leg
7
1
gastrocnemius medialis
4
distal epiphysis of femur
1
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