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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
8
snATAC-seq
2
ATAC-seq
2
WGBS
1
pCHi-C
Assay category
80
DNA binding
Target of assay
57
transcription factor
14
control
10
RNA binding protein
10
chromatin remodeller
7
histone
7
histone modification
4
broad histone mark
3
narrow histone mark
3
other context
3
other post-translational modification
Date released
34
December, 2018
25
January, 2019
21
November, 2018
Available data
80
bam
80
fastq
66
bed narrowPeak
66
bigBed narrowPeak
66
bigWig
Organism
80
Homo sapiens
Biosample type
60
cell line
20
tissue
Organ
494
liver
206
pancreas
203
brain
152
connective tissue
134
heart
123
epithelium
96
vasculature
95
blood vessel
72
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
35
nerve
34
artery
26
musculature of body
22
embryo
20
spleen
15
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
80
AMP
Genome assembly (visualization)
66
GRCh38
66
hg19
Lab
80
AMP-T2D consortium
Audit category:
1
inconsistent control
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
80 results
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ChIP-seq
cell line
GM12878
60
tissue
spleen
20
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