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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
Assay category
19
DNA binding
Target of assay
13
transcription factor
10
chromatin remodeller
7
histone
7
histone modification
4
RNA binding protein
4
narrow histone mark
3
broad histone mark
recombinant protein
Date released
7
November, 2017
6
August, 2017
5
November, 2018
1
October, 2018
Available data
55
bam
55
bigWig
55
fastq
53
bed narrowPeak
30
bigBed narrowPeak
bed broadPeak
13
bigBed broadPeak
11
tagAlign
10
bed bed3+
Organism
19
Homo sapiens
Biosample type
12
cell line
6
tissue
1
primary cell
Organ
13
liver
5
pancreas
Project
19
AMP
Genome assembly (visualization)
19
hg19
17
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
19
inconsistent control read length
9
inconsistent control run_type
1
inconsistent assembly
files.file_type!
bed broadPeak
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
19 results
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Clear Filters
ChIP-seq
cell line
HepG2
12
tissue
pancreas
4
body of pancreas
1
liver
1
primary cell
skeletal muscle myoblast
1
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