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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
270
ChIP-seq
Assay category
270
DNA binding
Target of assay
197
transcription factor
71
control
recombinant protein
65
histone
65
histone modification
40
broad histone mark
30
RNA binding protein
25
narrow histone mark
11
chromatin remodeller
1
other context
1
other post-translational modification
Date released
715
February, 2021
399
May, 2021
370
August, 2017
341
May, 2020
319
August, 2021
297
October, 2019
270
November, 2017
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
63
November, 2018
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
19
April, 2020
19
October, 2017
16
January, 2021
15
May, 2023
15
November, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2023
4
August, 2018
4
March, 2019
4
October, 2022
3
June, 2018
1
August, 2022
Available data
326
bam
268
bigWig
258
fastq
247
bed narrowPeak
246
bigBed narrowPeak
78
tagAlign
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
270
Homo sapiens
Biosample type
191
cell line
76
tissue
3
primary cell
Organ
191
liver
79
brain
2
epithelium
2
vasculature
1
blood vessel
Project
270
AMP
Genome assembly (visualization)
159
GRCh38
146
hg19
Lab
270
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
7
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed broadPeak
target.investigated_as!
recombinant protein
organ_slims!
skin of body
BIOSAMPLE
ASSAY
270 results
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Clear Filters
ChIP-seq
cell line
HepG2
191
tissue
layer of hippocampus
22
caudate nucleus
14
substantia nigra
14
cingulate gyrus
12
middle frontal area 46
12
+ See 1 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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