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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
7
total RNA-seq
Hi-C
1
WGBS
Assay category
18
DNA binding
7
Transcription
1
DNA methylation
Target of assay
17
control
1
histone
1
histone modification
1
narrow histone mark
Date released
21
October, 2019
3
February, 2020
1
July, 2019
1
May, 2019
Available data
114
bam
bed narrowPeak
91
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
26
Homo sapiens
Biosample type
26
tissue
Organ
723
pancreas
608
connective tissue
478
adipose tissue
365
epithelium
346
liver
199
heart
170
kidney
151
bone element
98
vasculature
96
blood vessel
80
brain
67
artery
30
musculature of body
28
eye
26
limb
23
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
11
spleen
8
skeleton
7
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
26
AMP
Genome assembly (visualization)
5
GRCh38
4
hg19
Lab
26
AMP-T2D consortium
files.file_type!
bed narrowPeak
assay_title!
Hi-C
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
total RNA-seq
WGBS
tissue
tibial nerve
11
5
tibial artery
5
1
muscle of leg
1
1
gastrocnemius medialis
1
islet of Langerhans
1
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