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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
15
total RNA-seq
2
ATAC-seq
Assay category
17
DNA binding
15
Transcription
2
DNA accessibility
Target of assay
11
control
6
histone
6
histone modification
5
broad histone mark
1
narrow histone mark
Date released
674
February, 2021
314
May, 2020
269
August, 2017
266
May, 2021
139
February, 2023
128
May, 2022
125
October, 2019
120
July, 2018
107
August, 2021
98
July, 2019
93
November, 2017
61
March, 2020
31
October, 2018
26
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
19
September, 2020
16
January, 2021
15
April, 2019
14
November, 2018
14
November, 2020
12
May, 2023
11
October, 2017
10
April, 2020
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
7
December, 2019
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
Available data
56
fastq
54
bam
45
bigWig
bed narrowPeak
15
tsv
14
tagAlign
6
bigBed narrowPeak
4
bed broadPeak
Organism
34
Homo sapiens
Biosample type
23
in vitro differentiated cells
11
tissue
Organ
10
brain
7
embryo
1
pancreas
Project
34
AMP
Genome assembly (visualization)
17
GRCh38
16
hg19
Lab
33
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
1
missing controlled_by
files.file_type!
bed narrowPeak
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
34 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
in vitro differentiated cells
pancreatic endoderm
3
4
definitive endodermal cell
1
2
embryonic stem cell
1
2
endocrine cell
1
2
posterior foregut
1
2
+ See 2 more…
tissue
brain
9
cerebellum (Hemisphere)
1
islet of Langerhans
1
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