Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
5
Hi-C
4
ATAC-seq
2
Capture-C
2
pCHi-C
2
total RNA-seq
1
snATAC-seq
Assay category
22
DNA binding
Target of assay
10
transcription factor
9
control
3
histone
3
histone modification
2
narrow histone mark
1
RNA binding protein
1
broad histone mark
Date released
15
August, 2017
5
December, 2017
2
September, 2017
Available data
1578
bam
1350
bigWig
bed narrowPeak
857
fastq
801
bigBed narrowPeak
398
tagAlign
114
bed broadPeak
79
bigBed broadPeak
53
bed bed3+
3
tar
1
tagAlign bed3+
Organism
22
Homo sapiens
Biosample type
16
tissue
5
in vitro differentiated cells
1
stem cell
Organ
11
pancreas
5
connective tissue
4
adipose tissue
1
embryo
1
liver
Project
22
AMP
Genome assembly (visualization)
22
GRCh38
22
hg19
Lab
22
AMP-T2D consortium
Audit category:
13
missing controlled_by
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
22 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
islet of Langerhans
11
white adipose tissue
4
liver
1
in vitro differentiated cells
Posterior foregut
1
adipocyte
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
Download