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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
398
total RNA-seq
66
ChIP-seq
6
WGBS
3
small RNA-seq
2
ATAC-seq
2
pCHi-C
1
RNA microarray
Assay category
66
DNA binding
Target of assay
30
histone
30
histone modification
24
control
20
broad histone mark
12
transcription factor
10
narrow histone mark
Date released
48
August, 2017
18
October, 2018
Available data
37
bam
37
fastq
19
bigWig
8
tagAlign
bed narrowPeak
6
bigBed narrowPeak
4
bed bed3+
1
bed broadPeak
Organism
66
Homo sapiens
Biosample type
66
tissue
Organ
139
liver
95
connective tissue
78
pancreas
66
adipose tissue
48
brain
32
epithelium
27
vasculature
26
blood vessel
20
heart
18
limb
13
kidney
12
musculature of body
11
nerve
9
artery
8
embryo
8
spleen
7
vein
6
blood
6
bodily fluid
4
gonad
4
ovary
3
eye
1
lymph node
Project
66
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
66
AMP-T2D consortium
Audit category:
12
missing controlled_by
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
35
white adipose tissue
12
subcutaneous adipose tissue
10
omental fat pad
8
adipose tissue
1
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