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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
136
total RNA-seq
88
ChIP-seq
21
ATAC-seq
5
pCHi-C
4
GRO-seq
4
Hi-C
2
Capture-C
2
single cell RNA-seq
Assay category
21
DNA accessibility
Date released
10
February, 2023
5
May, 2021
4
February, 2021
2
October, 2019
Available data
bed narrowPeak
17
bam
12
bigWig
7
bed bedgraph
5
bed bed3
4
bed bed3+
3
txt
2
bigBed narrowPeak
Organism
21
Homo sapiens
Biosample type
161
primary cell
52
tissue
21
in vitro differentiated cells
19
cell line
Organ
15
connective tissue
Project
21
AMP
Genome assembly (visualization)
21
hg19
Lab
15
AMP-T2D consortium
5
Kyle Gaulton, UCSD
1
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
files.file_type!
bed narrowPeak
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
21 results
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ATAC-seq
in vitro differentiated cells
adipocyte
7
chondrocyte
5
embryonic stem cell
5
immature adipocyte
2
Progenitor cell of Hypothalamus (neural progenitor cell)
1
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