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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
total RNA-seq
16
small RNA-seq
12
WGBS
6
RRBS
4
Hi-C
1
ATAC-seq
Assay category
47
Transcription
18
DNA methylation
4
3D chromatin structure
1
DNA accessibility
Date released
537
February, 2021
218
August, 2017
166
May, 2020
165
August, 2021
120
July, 2018
91
October, 2019
70
July, 2019
47
September, 2023
40
May, 2021
38
March, 2020
32
February, 2023
29
October, 2018
28
May, 2022
25
February, 2020
24
November, 2017
22
May, 2019
20
November, 2019
19
April, 2020
15
April, 2019
15
May, 2023
12
December, 2017
11
October, 2017
9
November, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
March, 2019
4
December, 2018
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
1
January, 2019
Available data
64
bam
63
bigWig
47
tsv
14
bed bedMethyl
14
bigBed bedMethyl
bed narrowPeak
2
bigBed narrowPeak
Organism
70
Homo sapiens
Biosample type
70
tissue
31
primary cell
Organ
16
heart
10
adipose tissue
10
brain
10
connective tissue
8
liver
7
musculature of body
6
pancreas
5
blood vessel
5
limb
5
vasculature
3
kidney
1
pericardium
Project
70
AMP
Genome assembly (visualization)
56
GRCh38
53
hg19
Lab
70
AMP-T2D consortium
files.file_type!
bed narrowPeak
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
70 results
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total RNA-seq
small RNA-seq
WGBS
RRBS
Hi-C
ATAC-seq
tissue
heart left ventricle
2
4
1
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
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